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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015797863.1_cds_XP_016456961.1_5028
CDS Infomation

[gene=LOC107780809] [db_xref=GeneID:107780809] [protein=probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X4] [protein_id=XP_016456961.1] [location=complement(join(24869..24921,25070..25417,25781..27763,28035..28178,28295..28334))] [gbkey=CDS]
Sequence

ATGCTTGAGTTATTAAGCCTTGGGGGAAATAACTTAGAAGGCATAATTCCAGATACAATT
GGAAATTTACGAAAATTGCAGAAATTGCAACTTGAGAACAACCACTTAGTGGGTTCAATA
CCGCGCACCATATTCAACATGTCATCACTATGGTTGCTTAATTTCAACACCAACAATTTA
TCTGCAGGTGTTATACCTAGAGAGATTGGGAATCTTCAAAAATTGGAGTTACTTTACTTG
CAATTCAATAAATTAAGTGGTTCCTTACCGGAAGAGCTCTTCAATATTTCTACGCTAAGA
GGGATGGCACTTTCTTACAATAACTTTTCGGGTAGTCTTCCATCTGCTTTAGGCTACTGG
CCAACAACTCTACAGTATTTGCATCTTGGTGAAAACAACATTGGTGGAGTTATACCCAAC
TCAGTGTTCAATTCTTCAAATCTAAAGGAATTAATACTTGATGATAACAGATTCAGCGGC
GCAATTCCTAACTCGTTAGGGGATTTGAGACAGCTTGAACGTTTGCGCTTGTTCCGTAAT
AACTTAACATTTCCACAACTAAGTATCTTTGCTTCCTTGGCAAACTGCAGATCTTTGAGA
GAGATAGATTTGTCGGATAATCCTCTTAATGGTGTTCTTTCAGATTCCATTGGCAATCTC
TCCACTTCTCTTGAACTGTTTGATTTACGTCATTCTGAAATTAGTGGCCAGATACCATTA
GGAATTGGGAATTTAAGTAACTTAACTGATTTGTACCTATTAGACAATGATTTGACTGGA
TCAGTGCCTAGCACATTCTGTGATCTACACAATCTTCAAAGGTTATATCTTCACCAGAAT
AGATTAATTGGACCCTTGCCGGAATGCCTCTGCAATTTGCCGGTGTTGGGCATGGTATCT
TTGTCATATAATCAAATTTCGGGTCCGATACCGTATTGCATTGGTAACGTTACCTCTTTG
AGAAATATTTATCTAAATTCAAATAGGCTCACTAAGATACCTATGAGTTTATGGAGCCTC
AAAGATCTTGTGGAGCTTGACTTGTCGAATAATTCTTTGGTTGGTTCTTTACCTCCAGAT
TTTGGAAATTTGAATGCCATAACATTCTTAGATTTGTCAAGGAATCACATTTCAGGAAGT
GTTCCGAGCACAGTGGGGGACTTGCAGAAACTACTTTATCTTTCTGTGGCTTATAACGAG
TTACAAGGATCTATTCCTGAGTCACTTGGAAAAATGTTAAGTTTGGAGTCGGTGAATCTA
TCCAATAACTATCTTTCAGGTATGATTCCAAAATCATTAGAGGCACTTCAATATGTAAAG
CATTTCAATGTATCATTCAATAGATTAGAAGGTGAAATCCCAAGTAAAGGACCATTTGTC
AATTTCACCTCTCAATCTTTTATGGGAAATGAAGAGTTATGTGGTGGTTTCCTTTTCTTA
CCTTGTAAGAATAGGTCCGTTCATCAATCGCGGAGAAACAAAGTTCTTCTGATTGTACTT
ATCCCACTGGCAGTTTTATTGATGGGATTAGGTTCAATTATTCTTTTCATGTTAAAGAGA
CGTGGGAATAGAAATATTCCAACTCAAGTCGAATCTTTACCTGCAACAACAACACCAACC
AGGATTTCATATATTGAAATTGAAAGGGCAACTCAAGGGTTCGACCAATGCAACTTGCTA
GGCCGTGGAGGTTTTGGCTCTGTTTACAAGGGCATGTTTTCAAATGGGATGGTTTTGGCC
ATCAAAGTGTTTACCTTACAATCTGAAGTTGCATTCAAGAGTTTTGATCTTGAATGTGAA
GTTTTGCGCAACCTTCGCCATAGAAATCTCACCAAAGTTATCAGCAGTTGTTCCAACATG
GATTTTAAAGCATTACTACTAGAGTACATGCCTAATGGCAGCTTGGAGAAATGGTTACAT
TCTGATGATTACTTCCTGGACATAATCCAAAGATTAGACGTAATGATTGATGTGGCATCT
GCTCTGGAATATCTCCACCATGGTTGCTCAACAGTTATTGTACATTGTGACTTGAAGCCT
AGTAATGTCTTGCTAGACGAAAAGTTGGTTGGACATGTGAGTGACTTTGGCATGGCAAAG
TTATTGGGAGAAGGGGAATCTATTGTTCATACTAAAACACTTGCTACAATGGGTTACATT
GCACCAGAGTATGGATCAGTAGGGTTAGTTTCTACAAGCTGTGATGTATATAGCTATGGC
ATTATGCTTATGGAAACTTTCACAAGAAAAAATCCATACAACGAAATGTTTCAAGAAAAC
TTGAGCATGAGGAGTTGGGTATGTAATTCACTACCTGTAGCACCAGAGGATATTATTGAT
GTCAGTTTATTGGAATCTGAAAAGATTGGTTTTAAGAAAAAGTTGCATTGTGTGTCTGCT
ATATTGGAGTTGGCATTGAATTGTACAGCGGAATCTCCTAATGAGAGGTTGAACATGAAA
GATATCCTGGCAAATATCAAGAAGATCAAACTTGCATTTCTTCGCGAATGTGATGATGCT
CCAAACATGCCATTCTTGCTCAACCCAAAACAAAAGAGAGGAGGATAA

Peptide Sequence

PEP ID

XP_016456961.1
PEP Infomation

PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X4 [Nicotiana tabacum]
Sequence

MLELLSLGGNNLEGIIPDTIGNLRKLQKLQLENNHLVGSIPRTIFNMSSLWLLNFNTNNL
SAGVIPREIGNLQKLELLYLQFNKLSGSLPEELFNISTLRGMALSYNNFSGSLPSALGYW
PTTLQYLHLGENNIGGVIPNSVFNSSNLKELILDDNRFSGAIPNSLGDLRQLERLRLFRN
NLTFPQLSIFASLANCRSLREIDLSDNPLNGVLSDSIGNLSTSLELFDLRHSEISGQIPL
GIGNLSNLTDLYLLDNDLTGSVPSTFCDLHNLQRLYLHQNRLIGPLPECLCNLPVLGMVS
LSYNQISGPIPYCIGNVTSLRNIYLNSNRLTKIPMSLWSLKDLVELDLSNNSLVGSLPPD
FGNLNAITFLDLSRNHISGSVPSTVGDLQKLLYLSVAYNELQGSIPESLGKMLSLESVNL
SNNYLSGMIPKSLEALQYVKHFNVSFNRLEGEIPSKGPFVNFTSQSFMGNEELCGGFLFL
PCKNRSVHQSRRNKVLLIVLIPLAVLLMGLGSIILFMLKRRGNRNIPTQVESLPATTTPT
RISYIEIERATQGFDQCNLLGRGGFGSVYKGMFSNGMVLAIKVFTLQSEVAFKSFDLECE
VLRNLRHRNLTKVISSCSNMDFKALLLEYMPNGSLEKWLHSDDYFLDIIQRLDVMIDVAS
ALEYLHHGCSTVIVHCDLKPSNVLLDEKLVGHVSDFGMAKLLGEGESIVHTKTLATMGYI
APEYGSVGLVSTSCDVYSYGIMLMETFTRKNPYNEMFQENLSMRSWVCNSLPVAPEDIID
VSLLESEKIGFKKKLHCVSAILELALNCTAESPNERLNMKDILANIKKIKLAFLRECDDA
PNMPFLLNPKQKRGG

Transcript Sequence

Gene sequence data has not been registered.